STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26787.1Hypothetical protein; COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain. (239 aa)    
Predicted Functional Partners:
EAQ26786.1
Mechanosensitive ion channel family protein; COG3264 Small-conductance mechanosensitive channel.
       0.818
EAQ26785.1
Pyridoxal-phosphate dependent enzyme; COG0031 Cysteine synthase.
  
    0.804
EAQ26783.1
Tellurite resistance protein; COG0422 Thiamine biosynthesis protein ThiC.
 
     0.776
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
     
 0.655
EAQ26781.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
       0.633
EAQ26782.1
Cyclopropane-fatty-acyl-phospholipid synthase CfaS; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
       0.631
EAQ26784.1
Tellurite resistance protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.597
EAQ26780.1
Aminotransferase, class V; COG0520 Selenocysteine lyase.
       0.484
EAQ23975.1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
  0.441
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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