STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26791.1Oxidoreductase, GMC family protein; COG2303 Choline dehydrogenase and related flavoproteins. (540 aa)    
Predicted Functional Partners:
EAQ23561.1
RNA polymerase sigma subunit; COG0666 FOG: Ankyrin repeat; Belongs to the sigma-70 factor family.
    
 0.793
EAQ26382.1
WD domain/cytochrome c family protein; COG2319 FOG: WD40 repeat.
  
 0.789
EAQ24288.1
Hypothetical protein.
    
  0.767
EAQ26995.1
NADH dehydrogenase subunit C.
    
 0.754
EAQ24859.1
COG0457 FOG: TPR repeat.
    
  0.718
EAQ25142.1
TPR domain protein; COG0457 FOG: TPR repeat.
    
  0.718
EAQ25855.1
Methyltransferase, FkbM family protein; COG0438 Glycosyltransferase.
    
  0.718
EAQ26486.1
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
  
  
 
0.716
EAQ24988.1
Probable dioxygenase alpha chain; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
    
 0.664
EAQ27359.1
Glucose-methanol-choline oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins.
  
  
 
0.632
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.