STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EAQ26791.1Oxidoreductase, GMC family protein; COG2303 Choline dehydrogenase and related flavoproteins. (540 aa)    
Predicted Functional Partners:
EAQ23561.1
RNA polymerase sigma subunit; COG0666 FOG: Ankyrin repeat; Belongs to the sigma-70 factor family.
    
 0.747
EAQ26382.1
WD domain/cytochrome c family protein; COG2319 FOG: WD40 repeat.
  
 0.740
EAQ24288.1
Hypothetical protein.
    
  0.727
EAQ26995.1
NADH dehydrogenase subunit C.
    
  0.725
EAQ24859.1
COG0457 FOG: TPR repeat.
    
  0.703
EAQ25142.1
TPR domain protein; COG0457 FOG: TPR repeat.
    
  0.703
EAQ25855.1
Methyltransferase, FkbM family protein; COG0438 Glycosyltransferase.
    
  0.703
EAQ23975.1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 
  0.622
EAQ23012.1
Ferredoxin/Oxidoreductase FAD/NAD(P)-binding; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
    
 0.569
EAQ26644.1
Oxidoreductase NAD-binding domain/2Fe-2S iron-sulfur cluster binding domain protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
 0.569
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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