STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26794.1COG4889 Predicted helicase. (557 aa)    
Predicted Functional Partners:
EAQ26793.1
Hypothetical protein; COG0326 Molecular chaperone, HSP90 family.
 
  
 0.954
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.902
EAQ26795.1
COG1253 Hemolysins and related proteins containing CBS domains.
       0.854
EAQ26797.1
DNA cytosine methyltransferase M.NgoMIII; COG0270 Site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
   
 0.801
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.770
EAQ27127.1
Hypothetical protein; COG0753 Catalase.
    
  0.764
EAQ27128.1
Hypothetical protein; COG3436 Transposase and inactivated derivatives.
    
  0.764
EAQ24325.1
COG0514 Superfamily II DNA helicase.
 
 
 0.758
EAQ26796.1
XorII very-short-patch-repair endonuclease; COG3727 DNA G:T-mismatch repair endonuclease.
 
     0.727
EAQ26382.1
WD domain/cytochrome c family protein; COG2319 FOG: WD40 repeat.
   
  0.696
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.