Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26803.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
EAQ26804.1
Hypothetical protein.
 
    0.890
EAQ24514.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
  0.716
EAQ25880.1
Fumarate hydratase, class I, putative; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.635
EAQ24319.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
     
  0.614
EAQ27555.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
     
  0.614
EAQ23495.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
     
 0.613
EAQ22807.1
DNA methylase N-4/N-6; COG1475 Predicted transcriptional regulators.
 
     0.593
EAQ26807.1
DNA methylase N-4/N-6; COG1475 Predicted transcriptional regulators; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.583
EAQ26838.1
DNA methylase N-4/N-6; COG1475 Predicted transcriptional regulators; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.583
EAQ26808.1
Hypothetical protein.
  
     0.579
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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