Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ26817.1ABC transporter, binding protein component; COG0687 Spermidine/putrescine-binding periplasmic protein. (364 aa)    
Predicted Functional Partners:
EAQ26815.1
ABC transporter, permease; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 0.944
EAQ25552.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.917
EAQ24084.1
Polyamine ABC transporter, permease protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.914
EAQ24083.1
ABC polyamine/opine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
  0.763
EAQ24719.1
ABC transporter permease protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
  0.727
EAQ25551.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
  0.696
EAQ25737.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
   
  0.679
EAQ25757.1
Binding-protein-dependent transport systems inner membrane component; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
   
  0.679
EAQ25415.1
Permease protein of polyamine ABC transporter; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
   
  0.679
EAQ24423.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
   
  0.679
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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