STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26845.1Hypothetical protein. (275 aa)    
Predicted Functional Partners:
EAQ26847.1
TRAP-T family transporter, fused inner membrane subunits; COG4666 TRAP-type uncharacterized transport system, fused permease components.
       0.745
EAQ26846.1
Hypothetical protein; COG0625 Glutathione S-transferase.
       0.741
EAQ25328.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
    
 0.596
EAQ25329.1
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
    
  0.591
EAQ24242.1
Cyclase family protein; COG1878 Predicted metal-dependent hydrolase.
  
    0.557
EAQ26848.1
Immunogenic protein (bcsp31-2); COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
       0.523
EAQ26850.1
Hypothetical protein.
 
    
0.500
EAQ26646.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
    0.486
lcdH
3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
 
 0.482
EAQ23483.1
Hypothetical protein; COG0824 Predicted thioesterase.
 
 
 0.415
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.