STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26845.1Hypothetical protein. (275 aa)    
Predicted Functional Partners:
EAQ26847.1
TRAP-T family transporter, fused inner membrane subunits; COG4666 TRAP-type uncharacterized transport system, fused permease components.
       0.744
EAQ26846.1
Hypothetical protein; COG0625 Glutathione S-transferase.
       0.741
EAQ23947.1
3-oxoadipate enol-lactone hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
     
  0.621
EAQ25328.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
    
 0.552
EAQ24242.1
Cyclase family protein; COG1878 Predicted metal-dependent hydrolase.
  
    0.552
EAQ25329.1
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
    
 0.540
EAQ26646.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
    0.529
EAQ26848.1
Immunogenic protein (bcsp31-2); COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
       0.524
EAQ23667.1
COG1454 Alcohol dehydrogenase, class IV.
     
  0.523
lcdH
3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
 
 0.503
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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