STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26852.1Regulatory protein, IclR; COG1414 Transcriptional regulator. (274 aa)    
Predicted Functional Partners:
EAQ26851.1
acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
  0.829
EAQ26854.1
Probable carboxylase; COG5016 Pyruvate/oxaloacetate carboxyltransferase.
 
  
  0.691
EAQ26849.1
Putative 5-keto-D-gluconate 5-reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
    0.641
EAQ26850.1
Hypothetical protein.
  
    0.637
EAQ26853.1
COG0439 Biotin carboxylase.
    
  0.627
EAQ27140.1
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
    
  0.593
EAQ27458.1
Phosphate acetyltransferase; COG2030 Acyl dehydratase.
    
 0.575
EAQ26848.1
Immunogenic protein (bcsp31-2); COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
       0.433
EAQ26847.1
TRAP-T family transporter, fused inner membrane subunits; COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
     0.413
EAQ24415.1
COG1802 Transcriptional regulators.
  
    0.410
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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