STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26869.1Hypothetical protein yghO. (425 aa)    
Predicted Functional Partners:
EAQ26870.1
Hypothetical protein; COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase.
 
     0.923
EAQ26860.1
Phosphopantetheine attachment site protein; COG0236 Acyl carrier protein.
 
   
 0.865
EAQ26874.1
Hypothetical protein; COG1708 Predicted nucleotidyltransferases.
 
     0.816
EAQ26875.1
DAG-kinase catalytic domain protein; COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
 
     0.814
EAQ26858.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
   
 0.781
EAQ26859.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
  
 0.778
EAQ26861.1
Hypothetical protein; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.
 
   
 0.703
EAQ24797.1
COG4453 Uncharacterized protein conserved in bacteria.
   
   0.676
EAQ26864.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
    0.650
EAQ26867.1
Fatty acid hydroxylase; COG3000 Sterol desaturase.
 
     0.648
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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