Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26880.1Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins. (970 aa)    
Predicted Functional Partners:
EAQ25253.1
Type I secretion membrane fusion protein, HlyD family protein; COG0845 Membrane-fusion protein.
 
  
 0.647
EAQ25252.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
 
 
 0.641
EAQ24976.1
COG0845 Membrane-fusion protein.
 
  
 0.590
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.522
EAQ24975.1
Probable ATP-binding/permease fusion ABC transporter; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
  
 0.520
EAQ24452.1
Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
 
0.503
EAQ26408.1
VCBS; COG5295 Autotransporter adhesin.
  
 
0.499
EAQ26113.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
 
0.482
EAQ25010.1
Putative Hemin receptor protein HmuR; COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
 
 0.481
EAQ25127.1
Hypothetical protein.
   
   0.479
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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