STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26917.1ABC transporter, inner membrane subunit; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component. (261 aa)    
Predicted Functional Partners:
EAQ26918.1
ABC transporter, ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 0.999
EAQ25406.1
Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.998
EAQ26254.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
   
  0.974
EAQ25250.1
Toluene tolerance family protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
 
 0.960
EAQ26916.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.876
EAQ26919.1
Hypothetical protein; COG2995 Uncharacterized paraquat-inducible protein A.
       0.876
EAQ25251.1
COG2853 Surface lipoprotein.
 
   
 0.740
EAQ24622.1
ABC transporter, ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
 
  
  0.724
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
       0.663
EAQ23878.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
 0.654
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.