Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26919.1Hypothetical protein; COG2995 Uncharacterized paraquat-inducible protein A. (153 aa)    
Predicted Functional Partners:
EAQ26918.1
ABC transporter, ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
   
 0.882
EAQ26916.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.853
EAQ26917.1
ABC transporter, inner membrane subunit; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
       0.853
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
     
 0.653
EAQ23118.1
Possible Endonuclease/Exonuclease/phosphatase fa.
  
     0.646
EAQ26920.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.630
EAQ27576.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.626
EAQ24243.1
Hypothetical protein.
  
     0.625
EAQ25707.1
Paraquat-inducible protein, putative; COG3008 Paraquat-inducible protein B.
  
 
 0.603
EAQ26922.1
CvpA family protein; COG1286 Uncharacterized membrane protein, required for colicin V production.
       0.584
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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