Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ26951.1FeS assembly protein SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component. (507 aa)    
Predicted Functional Partners:
EAQ26947.1
FeS assembly protein SufD; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
0.999
EAQ26948.1
FeS assembly ATPase SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 0.999
EAQ26944.1
Cysteine desulfurase SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.986
EAQ26754.1
Fe-S metabolism associated family protein; COG2166 SufE protein probably involved in Fe-S center assembly.
 
 
 0.943
EAQ26558.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
 
 
 0.939
EAQ26952.1
Putative aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 
 0.929
EAQ26780.1
Aminotransferase, class V; COG0520 Selenocysteine lyase.
 
 
 0.886
EAQ26950.1
Hypothetical protein; Belongs to the UPF0145 family.
  
  
 0.886
EAQ26687.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 0.854
EAQ26946.1
Hypothetical protein.
     
 0.848
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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