Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EAQ27004.1Thermonuclease family protein; COG1525 Micrococcal nuclease (thermonuclease) homologs. (198 aa)    
Predicted Functional Partners:
EAQ25462.1
ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.
    
 0.805
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
 
 0.754
EAQ27005.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
       0.752
EAQ23459.1
ATP-dependent RNA helicase, DEAD/DEAH box family protein; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
    
  0.735
EAQ25082.1
Putative ATP-dependent RNA helicase protein; COG0513 Superfamily II DNA and RNA helicases.
    
  0.735
EAQ27088.1
COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
    
  0.735
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.691
EAQ26048.1
Hypothetical protein; COG1203 Predicted helicases.
 
     0.656
EAQ27002.1
COG0625 Glutathione S-transferase.
 
     0.641
EAQ27003.1
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
       0.576
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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