Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ27061.1ATPase, AAA family protein; COG0714 MoxR-like ATPases. (279 aa)    
Predicted Functional Partners:
EAQ27064.1
COG3825 Uncharacterized protein conserved in bacteria.
 
    0.921
dksA
dnaK suppressor protein, putative; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
       0.699
EAQ24387.1
Lipoprotein, putative; COG2812 DNA polymerase III, gamma/tau subunits.
    
  0.620
EAQ27062.1
Hypothetical protein.
       0.619
EAQ24810.1
COG4548 Nitric oxide reductase activation protein.
  
 
 0.618
EAQ23444.1
COG4548 Nitric oxide reductase activation protein.
  
 
 0.618
EAQ24131.1
COG1960 Acyl-CoA dehydrogenases.
  
     0.555
EAQ27059.1
Salicylate hydroxylase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
       0.520
EAQ27249.1
COG1960 Acyl-CoA dehydrogenases.
  
     0.517
EAQ25841.1
Predicted Orn/Lys/Arg decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases.
   
   0.484
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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