Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ27081.1TRAP transporter solute receptor, DctP family protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component. (341 aa)    
Predicted Functional Partners:
EAQ27082.1
TRAP transporter, DctQ subunit; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
  0.929
EAQ27083.1
TRAP transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 
  0.924
EAQ26072.1
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 
 0.906
EAQ22881.1
COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
  0.792
EAQ22882.1
TRAP dicarboxylate transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.758
EAQ24745.1
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.752
EAQ26403.1
Putative inner membrane protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.750
EAQ25535.1
Putative transmembrane protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.743
EAQ24853.1
TRAP dicarboxylate transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.715
EAQ24410.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.690
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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