Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ27164.1Hypothetical protein. (762 aa)    
Predicted Functional Partners:
EAQ27178.1
Hypothetical protein.
  
 
   0.753
EAQ24609.1
core-2/I-branching enzyme family protein.
  
     0.749
EAQ27034.1
Hypothetical protein; COG0498 Threonine synthase.
  
     0.736
EAQ24610.1
Hypothetical protein.
  
     0.732
EAQ24542.1
epsK domain protein.
  
     0.731
EAQ24608.1
Hypothetical protein.
  
     0.731
EAQ24662.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.729
EAQ26771.1
Hypothetical protein.
  
     0.716
EAQ24541.1
Hypothetical protein.
  
     0.715
EAQ25199.1
COG3562 Capsule polysaccharide export protein.
  
     0.711
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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