Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ27168.1Cytochrome, putative; COG3038 Cytochrome B561; Belongs to the UPF0312 family. (404 aa)    
Predicted Functional Partners:
EAQ23250.1
Hypothetical protein; Belongs to the UPF0312 family.
 
  
 0.817
EAQ26652.1
Hypothetical protein; Belongs to the UPF0312 family.
 
  
 0.676
EAQ25346.1
Hypothetical protein; Belongs to the UPF0312 family.
 
  
 0.643
EAQ27167.1
COG0331 (acyl-carrier-protein) S-malonyltransferase.
       0.621
EAQ25672.1
Hypothetical protein.
  
     0.462
EAQ23874.1
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B.
  
  
 0.459
EAQ27166.1
3-oxoacyl-(acyl-carrier protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.455
EAQ24571.1
Electrotransfer ubiquinone oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.434
trpC
COG0134 Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
     
 0.428
EAQ24387.1
Lipoprotein, putative; COG2812 DNA polymerase III, gamma/tau subunits.
  
     0.427
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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