Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ27214.1Hypothetical protein; COG0524 Sugar kinases, ribokinase family. (257 aa)    
Predicted Functional Partners:
EAQ27213.1
PQQ enzyme repeat family protein; COG1520 FOG: WD40-like repeat.
 
     0.705
EAQ24345.1
Hypothetical protein.
  
     0.689
EAQ27266.1
Hypothetical protein; COG0711 F0F1-type ATP synthase, subunit b.
  
     0.641
EAQ25837.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
     0.627
EAQ24046.1
Hypothetical protein.
  
     0.621
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.604
EAQ27369.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
    0.598
EAQ27191.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.595
EAQ27043.1
Hypothetical protein.
  
    0.577
EAQ26741.1
Hypothetical protein.
  
     0.570
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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