Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ27251.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
EAQ27250.1
Metallo-beta-lactamase family protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
       0.815
EAQ27252.1
Hypothetical protein.
 
     0.796
EAQ27253.1
Lipoprotein, putative.
 
     0.750
EAQ27249.1
COG1960 Acyl-CoA dehydrogenases.
       0.721
EAQ27248.1
Sua5/YciO/YrdC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.622
EAQ25263.1
Hypothetical protein.
  
     0.594
EAQ27549.1
Hypothetical protein.
  
     0.496
EAQ24123.1
Hypothetical protein.
  
     0.469
EAQ26783.1
Tellurite resistance protein; COG0422 Thiamine biosynthesis protein ThiC.
  
     0.463
EAQ27348.1
Hypothetical protein.
  
     0.438
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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