STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ27318.1COG1233 Phytoene dehydrogenase and related proteins. (518 aa)    
Predicted Functional Partners:
EAQ27317.1
Squalene/phytoene synthase; COG1562 Phytoene/squalene synthetase.
 
 0.998
EAQ27315.1
Hydroxyneurosporene dehydrogenase.
 
 
 0.978
EAQ27111.1
Hypothetical protein; COG1562 Phytoene/squalene synthetase.
  
 
 0.963
EAQ27322.1
Magnesium-chelatase, BchO; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
    0.903
EAQ27316.1
TspO/MBR family protein; COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog).
 
  
 0.872
EAQ27319.1
Spheroidene monooxygenase.
 
  
 0.852
EAQ27321.1
Putative magnesium chelatase subunit BchD; COG1240 Mg-chelatase subunit ChlD.
 
  
 0.845
EAQ27320.1
Magnesium-chelatase, ChlI subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
 
 0.844
EAQ27312.1
COG0500 SAM-dependent methyltransferases.
 
 
 0.843
EAQ27283.1
Putative bacteriochlorophyll synthase, 34 kDa subunit; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
 
 0.823
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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