Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ27427.1Hypothetical protein; COG4783 Putative Zn-dependent protease, contains TPR repeats. (160 aa)    
Predicted Functional Partners:
EAQ27428.1
Probable methylamine; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
      0.824
EAQ27429.1
COG1309 Transcriptional regulator.
       0.773
potA-5
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
       0.623
EAQ27431.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
       0.623
EAQ27432.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
       0.623
EAQ27433.1
ABC transporter,binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
       0.469
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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