Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ27431.1COG1177 ABC-type spermidine/putrescine transport system, permease component II. (266 aa)    
Predicted Functional Partners:
EAQ27432.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.983
potA-5
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.981
EAQ27433.1
ABC transporter,binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
  0.967
EAQ25877.1
COG0687 Spermidine/putrescine-binding periplasmic protein.
  0.953
EAQ24720.1
Hypothetical polyamine ABC transporter, permease protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
  0.932
EAQ25551.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.932
EAQ25738.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
  0.919
EAQ25416.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
  0.917
potA-4
ABC permidine/putrescine transporter, ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  0.917
EAQ25014.1
COG0687 Spermidine/putrescine-binding periplasmic protein.
  0.912
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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