Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ27443.1Hypothetical protein; COG3509 Poly(3-hydroxybutyrate) depolymerase. (267 aa)    
Predicted Functional Partners:
EAQ24614.1
Membrane protein, putative; COG4645 Uncharacterized protein conserved in bacteria.
 
     0.773
EAQ24615.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.764
EAQ24618.1
COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
  
     0.744
EAQ24616.1
Hypothetical protein.
  
     0.739
EAQ26756.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.721
EAQ24612.1
Glucosyltransferase MdoH; COG2943 Membrane glycosyltransferase.
 
     0.648
EAQ26653.1
Glucosyltransferase MdoH; COG2943 Membrane glycosyltransferase.
 
     0.593
EAQ27441.1
Putative acetyltranferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.576
EAQ27442.1
Methyl transferase-like protein; COG0500 SAM-dependent methyltransferases.
       0.576
EAQ27445.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
     
 0.557
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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