STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ27448.1COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase. (509 aa)    
Predicted Functional Partners:
EAQ27449.1
Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.949
EAQ25174.1
COG0415 Deoxyribodipyrimidine photolyase.
 
   
 0.779
EAQ25173.1
COG4338 Uncharacterized protein conserved in bacteria.
 
     0.689
EAQ26781.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
   
 0.611
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
       0.572
EAQ27175.1
Lipoprotein, putative.
 
   
 0.536
EAQ25041.1
Putative cyclopropane/cyclopropene fatty acid synthesis protein.
 
   
 0.528
EAQ25042.1
Sugar/cation symporter, GPH family protein; COG2211 Na+/melibiose symporter and related transporters.
 
   
 0.505
EAQ25040.1
Putative cyclopropane/cyclopropene fatty acid synthesis protein, flavin amine oxidase; COG2907 Predicted NAD/FAD-binding protein.
 
   
 0.495
EAQ25044.1
Short-chain dehydrogenase/reductase family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   
 0.489
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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