Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ27491.1Transposase, putative; COG2801 Transposase and inactivated derivatives. (707 aa)    
Predicted Functional Partners:
EAQ27490.1
ParB-like nuclease domain protein; COG1475 Predicted transcriptional regulators.
 
     0.957
EAQ27498.1
COG4382 Mu-like prophage protein gp16.
 
    0.950
EAQ27494.1
Hypothetical protein.
 
    0.949
EAQ27497.1
Hypothetical protein.
 
    0.947
EAQ27492.1
Prophage MuMc02, transposition protein B; COG0464 ATPases of the AAA+ class.
 
     0.944
EAQ27508.1
COG4383 Mu-like prophage protein gp29.
 
    0.815
EAQ25775.1
COG3501 Uncharacterized protein conserved in bacteria.
  
  0.804
EAQ27509.1
COG2369 Uncharacterized protein, homolog of phage Mu protein gp30.
 
    0.804
EAQ27505.1
Hypothetical protein.
 
    0.799
EAQ27510.1
Virion morphogenesis protein; COG5005 Mu-like prophage protein gpG.
 
     0.782
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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