Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ27563.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
EAQ27184.1
Hypothetical protein.
  
     0.769
EAQ27266.1
Hypothetical protein; COG0711 F0F1-type ATP synthase, subunit b.
  
     0.760
EAQ24582.1
Helicase, ATP-dependent, putative; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
  
     0.730
EAQ25837.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
     0.722
EAQ25664.1
Hypothetical protein.
  
     0.719
EAQ24046.1
Hypothetical protein.
  
     0.654
EAQ26741.1
Hypothetical protein.
  
     0.646
EAQ26674.1
DnaJ domain protein; COG2214 DnaJ-class molecular chaperone.
  
     0.642
EAQ27191.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.635
EAQ27253.1
Lipoprotein, putative.
  
     0.635
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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