Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ23129.1HNH endonuclease family protein; COG1403 Restriction endonuclease. (179 aa)    
Predicted Functional Partners:
EAQ23226.1
COG4626 Phage terminase-like protein, large subunit.
  
  
 0.585
EAQ24439.1
COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.556
EAQ23752.1
Type IV secretion system coupling protein; COG3505 Type IV secretory pathway, VirD4 components.
   
 
 0.545
EAQ24750.1
Type IV secretion system coupling protein; COG3505 Type IV secretory pathway, VirD4 components.
   
 
 0.545
EAQ22902.1
Type IV secretion system coupling protein; COG3505 Type IV secretory pathway, VirD4 components.
   
 
 0.545
EAQ26634.1
Putative aminomethyltransferase protein; Belongs to the GcvT family.
     
  0.526
EAQ23128.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.503
EAQ25451.1
Hypothetical protein.
  
    0.462
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
    
  0.445
EAQ23130.1
ABC transporter, ATP-binding/permease protein; COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components.
       0.436
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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