Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23146.1Hypothetical protein. (297 aa)    
Predicted Functional Partners:
EAQ25967.1
Hypothetical protein.
  
     0.754
EAQ23730.1
Transcriptional regulator, LuxR family protein; COG2771 DNA-binding HTH domain-containing proteins.
  
     0.744
EAQ24660.1
COG0500 SAM-dependent methyltransferases.
  
     0.725
EAQ26871.1
Putative sulfotransferase protein.
  
     0.721
EAQ26877.1
Putative sulfotransferase protein.
  
     0.711
EAQ23920.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.698
EAQ25811.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.676
EAQ26836.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.676
EAQ26875.1
DAG-kinase catalytic domain protein; COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
  
     0.675
EAQ25653.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.670
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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