STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU44777.1Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases. (352 aa)    
Predicted Functional Partners:
EAU44778.1
Predicted oxidoreductase, Gfo/Idh/MocA family protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
  0.980
EAU44780.1
ABC sugar (ribose) transporter, inner membrane subunit; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
    0.837
EAU44781.1
ABC ribose transporter, periplasmic solute-binding protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
     0.825
EAU44779.1
COG1129 ABC-type sugar transport system, ATPase component.
       0.784
EAU44776.1
Transcriptional regulator, LacI family protein; COG1609 Transcriptional regulators.
 
    0.698
EAU48001.1
Putative oxidoreductase protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
  0.694
EAU48153.1
Oxidoreductase, Gfo/Idh/MocA family protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
 0.686
EAU47200.1
Putative d-galactose 1-dehydrogenase protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
 0.676
EAU47173.1
Oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.652
EAU47721.1
COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.652
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.