STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU44785.1Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily. (327 aa)    
Predicted Functional Partners:
EAU44787.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.968
EAU44788.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.961
EAU44427.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.932
EAU48089.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.927
EAU44786.1
Peptide ABC transporter, ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 
0.918
EAU47243.1
COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
 0.913
EAU44783.1
Hypothetical protein; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
     0.864
EAU45373.1
COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
  0.841
EAU45372.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.838
EAU44784.1
Possible gamma-glutamyltranspeptidase precursor; COG0405 Gamma-glutamyltransferase.
 
     0.820
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.