STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU44786.1Peptide ABC transporter, ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (331 aa)    
Predicted Functional Partners:
EAU44787.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.979
EAU44788.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.969
EAU44785.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 
0.918
EAU45549.1
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.907
EAU47284.1
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.885
EAU46130.1
ABC transporter, membrane spanning protein (oligopeptide); COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.856
EAU47216.1
Oligopeptide/dipeptide ABC transporter, permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.850
EAU45889.1
ABC peptide transporter, inner membrane subunit; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 
  0.847
EAU48514.1
ABC transporter, membrane spanning protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.843
EAU44783.1
Hypothetical protein; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
     0.837
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.