STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU46176.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
EAU46178.1
COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
       0.800
EAU46174.1
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
       0.774
EAU46175.1
COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
       0.773
EAU46177.1
TRAP dicarboxylate transporter, DctM subunit; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
       0.773
EAU46173.1
COG1012 NAD-dependent aldehyde dehydrogenases.
       0.570
EAU46179.1
TRAP dicarboxylate family transporter, DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
       0.570
EAU46180.1
Transcriptional regulatory protein; COG1802 Transcriptional regulators.
       0.405
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.