STRINGSTRING
R2601_02113 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_02113" - Putative AsnC in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_02113Putative AsnC (Lrp)-family transcriptional activator (164 aa)    
Predicted Functional Partners:
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
   
  0.831
R2601_02108
AgaE protein, conversion of agropinic acid to mannopinic acid (441 aa)
 
          0.806
R2601_19382
Transcriptional regulator, AsnC family protein (151 aa)
   
          0.770
R2601_02168
Haloalkanoic acid dehalogenase (221 aa)
   
          0.738
R2601_02153
Uncharacterized protein (277 aa)
 
        0.715
R2601_02133
Probable oligopeptide ABC transporter, substrate-binding protein (536 aa)
 
          0.701
R2601_02178
Uncharacterized protein (331 aa)
   
          0.692
R2601_18985
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1142 aa)
   
   
  0.678
pqqE
Pyrroloquinoline quinone biosynthesis protein E (369 aa)
   
 
  0.669
R2601_02838
Uncharacterized protein (278 aa)
   
 
  0.669
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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