Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAU48389.1Hypothetical protein; COG4666 TRAP-type uncharacterized transport system, fused permease components. (768 aa)    
Predicted Functional Partners:
EAU48390.1
TRAP-T family transporter, periplasmic substrate binding subunit; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
    0.919
EAU47938.1
TRAP-T family transporter, DctP subunit; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
    0.824
EAU43717.1
TRAP transporter solute receptor, TAXI family protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
    0.817
EAU47728.1
Hypothetical protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
    0.813
EAU48388.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.773
EAU47671.1
Possible TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
    0.628
EAU47936.1
Hypothetical protein.
 
    0.416
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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