Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAU47270.1 | EAU48773.1 | R2601_06088 | R2601_04333 | COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase. | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | 0.431 |
EAU48004.1 | EAU48773.1 | R2601_01155 | R2601_04333 | COG3395 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | 0.460 |
EAU48770.1 | EAU48772.1 | R2601_04318 | R2601_04328 | Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein. | 0.705 |
EAU48770.1 | EAU48773.1 | R2601_04318 | R2601_04333 | Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | 0.425 |
EAU48770.1 | EAU48774.1 | R2601_04318 | R2601_04338 | Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein. | 0.412 |
EAU48772.1 | EAU48770.1 | R2601_04328 | R2601_04318 | Hypothetical protein. | Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.705 |
EAU48772.1 | EAU48773.1 | R2601_04328 | R2601_04333 | Hypothetical protein. | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | 0.459 |
EAU48772.1 | EAU48774.1 | R2601_04328 | R2601_04338 | Hypothetical protein. | Hypothetical protein. | 0.446 |
EAU48773.1 | EAU47270.1 | R2601_04333 | R2601_06088 | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase. | 0.431 |
EAU48773.1 | EAU48004.1 | R2601_04333 | R2601_01155 | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | COG3395 Uncharacterized protein conserved in bacteria. | 0.460 |
EAU48773.1 | EAU48770.1 | R2601_04333 | R2601_04318 | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.425 |
EAU48773.1 | EAU48772.1 | R2601_04333 | R2601_04328 | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | Hypothetical protein. | 0.459 |
EAU48773.1 | EAU48774.1 | R2601_04333 | R2601_04338 | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | Hypothetical protein. | 0.746 |
EAU48773.1 | ispDF | R2601_04333 | R2601_26271 | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.515 |
EAU48774.1 | EAU48770.1 | R2601_04338 | R2601_04318 | Hypothetical protein. | Transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.412 |
EAU48774.1 | EAU48772.1 | R2601_04338 | R2601_04328 | Hypothetical protein. | Hypothetical protein. | 0.446 |
EAU48774.1 | EAU48773.1 | R2601_04338 | R2601_04333 | Hypothetical protein. | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | 0.746 |
ispDF | EAU48773.1 | R2601_26271 | R2601_04333 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | Hypothetical protein; COG4091 Predicted homoserine dehydrogenase. | 0.515 |