STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU45008.1COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (362 aa)    
Predicted Functional Partners:
EAU45006.1
ABC sugar (glycerol) transporter, inner membrane subunit; COG1175 ABC-type sugar transport systems, permease components.
 
  0.970
EAU45005.1
ABC sugar (glycerol) transporter, inner membrane subunit; COG0395 ABC-type sugar transport system, permease component.
 
  0.956
EAU45003.1
ABC sugar (glycerol) transporter, periplasmic binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.950
EAU44005.1
Probable sorbitol/mannitol transport inner membrane protein; COG0395 ABC-type sugar transport system, permease component.
 
 0.835
EAU45004.1
Hypothetical protein; COG5477 Predicted small integral membrane protein.
 
     0.821
EAU45007.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
    
0.816
EAU46816.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
  
  0.803
EAU43605.1
ABC alpha-glucoside transporter, inner membrane subunit AglG; COG0395 ABC-type sugar transport system, permease component.
 
 0.803
EAU47162.1
ABC sugar transporter, inner membrane subunit; COG1175 ABC-type sugar transport systems, permease components.
  
  0.799
EAU44004.1
ABC sorbitol/mannitol transporter, inner membrane subunit; COG1175 ABC-type sugar transport systems, permease components.
  
  0.798
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.