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R2601_06253 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_06253" - Transcriptional regulator, IclR family protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
R2601_06253Transcriptional regulator, IclR family protein (533 aa)    
Predicted Functional Partners:
R2601_06478
Uncharacterized protein (264 aa)
   
          0.632
R2601_01035
Transcriptional regulator (IclR family) protein (262 aa)
   
          0.621
R2601_19704
Regulatory protein, IclR (205 aa)
   
          0.571
R2601_22252
Altronate hydrolase (498 aa)
   
   
  0.556
R2601_00240
Transcriptional Regulator, IclR family protein (251 aa)
   
          0.501
leuC
Isopropylmalate isomerase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (473 aa)
   
        0.457
leuD
Isopropylmalate isomerase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (201 aa)
   
        0.457
R2601_09148
3-isopropylmalate dehydratase large subunit ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (463 aa)
   
        0.457
R2601_09143
3-isopropylmalate dehydratase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (194 aa)
   
        0.457
R2601_15015
Uncharacterized protein (449 aa)
     
        0.454
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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