STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU47722.1COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. (312 aa)    
Predicted Functional Partners:
EAU47768.1
Oxidoreductase, FAD-binding, putative; COG0369 Sulfite reductase, alpha subunit (flavoprotein).
  
 0.994
EAU47724.1
Rieske (2Fe-2S) region; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
 
 0.981
EAU45968.1
Putative aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.955
EAU43575.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
 0.952
EAU46765.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
   
 0.945
EAU47721.1
COG0673 Predicted dehydrogenases and related proteins.
 
  
  0.937
EAU47231.1
CobG; COG0155 Sulfite reductase, beta subunit (hemoprotein).
   
 0.933
EAU45597.1
Rieske (2Fe-2S) protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
 
 0.933
EAU44835.1
COG0155 Sulfite reductase, beta subunit (hemoprotein).
   
 0.933
EAU43845.1
Probable oxidoreductase protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
 0.932
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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