STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU47736.1COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (231 aa)    
Predicted Functional Partners:
EAU47735.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 0.999
EAU44954.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 0.999
EAU47019.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 0.999
EAU47673.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 0.998
EAU47674.1
Probable 3-oxoadipate coa-transferase subunit b protein; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
0.946
EAU47737.1
Beta-ketothiolase protein; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.881
EAU47415.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.849
EAU48029.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.770
EAU45518.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.767
EAU44683.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.767
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.