STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU47740.1NTP-binding protein. (174 aa)    
Predicted Functional Partners:
EAU47710.1
COG2801 Transposase and inactivated derivatives.
 
   
 0.814
EAU47742.1
COG2801 Transposase and inactivated derivatives.
 
   
 0.814
EAU47739.1
Hypothetical protein.
       0.796
flgC
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.635
EAU48187.1
Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
    
   0.635
EAU47738.1
Pca operon transcriptional activator PcaQ; COG0583 Transcriptional regulator.
       0.543
EAU47813.1
Yld; Resembles DNA integrases; possible role in plasmid maintenance; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.421
EAU47450.1
Hypothetical protein.
 
     0.420
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.