STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU47762.1COG0642 Signal transduction histidine kinase. (445 aa)    
Predicted Functional Partners:
EAU45039.1
Sensor histidine kinase with multiple PAS and a response regulator receiver domain; COG2202 FOG: PAS/PAC domain.
   
 0.991
EAU44348.1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.987
EAU47763.1
Response regulator receiver:Transcriptional regulatory protein, C terminal; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.980
EAU46970.1
Two-component hybrid sensor and regulator; COG5002 Signal transduction histidine kinase.
 
0.976
EAU46530.1
Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 0.947
EAU46521.1
Chemotaxis multidomain, CheB methylesterase/CheR, Methylase; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
   
 0.937
EAU46531.1
Sensor protein fixL; COG2202 FOG: PAS/PAC domain.
 
 
 0.933
EAU47764.1
Hypothetical protein.
 
     0.902
EAU47767.1
Hypothetical protein.
 
     0.853
EAU47768.1
Oxidoreductase, FAD-binding, putative; COG0369 Sulfite reductase, alpha subunit (flavoprotein).
 
     0.849
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.