STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU44318.1Probable c-type cytochrome; COG2010 Cytochrome c, mono- and diheme variants. (111 aa)    
Predicted Functional Partners:
EAU44437.1
Cytochrome-c oxidase chain II/c precursor; COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
 0.981
EAU43865.1
COG3258 Cytochrome c.
   
 0.964
EAU46346.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.945
EAU46347.1
Ubiquinol--cytochrome c reductase, cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.937
EAU45736.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 0.925
EAU45735.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.919
EAU43535.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 0.876
EAU47010.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 0.876
EAU47112.1
Formate dehydrogenase, iron-sulfur subunit, putative; COG0437 Fe-S-cluster-containing hydrogenase components 1.
  
  0.769
EAU48140.1
Iron-sulfur cluster-binding protein; COG0437 Fe-S-cluster-containing hydrogenase components 1.
  
  0.769
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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