STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU44741.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
EAU44191.1
Hypothetical protein.
  
     0.763
EAU46046.1
Hypothetical protein.
  
     0.708
EAU44929.1
Predicted glycosyltransferase.
  
     0.701
EAU47478.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
  
     0.696
EAU46875.1
Hypothetical protein.
  
     0.620
EAU48243.1
Hypothetical protein.
  
     0.603
EAU44924.1
Hypothetical protein; COG2374 Predicted extracellular nuclease.
  
     0.564
EAU48067.1
Hypothetical protein; COG0178 Excinuclease ATPase subunit.
  
     0.562
EAU45943.1
Hypothetical protein.
  
     0.520
EAU44616.1
Hypothetical protein.
  
     0.510
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.