Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAU43816.1 | EAU44089.1 | R2601_16745 | R2601_08321 | Putative porin; COG3203 Outer membrane protein (porin). | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.695 |
| EAU43816.1 | EAU44175.1 | R2601_16745 | R2601_19352 | Putative porin; COG3203 Outer membrane protein (porin). | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | 0.695 |
| EAU44089.1 | EAU43816.1 | R2601_08321 | R2601_16745 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Putative porin; COG3203 Outer membrane protein (porin). | 0.695 |
| EAU44089.1 | EAU44175.1 | R2601_08321 | R2601_19352 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | 0.817 |
| EAU44089.1 | EAU44857.1 | R2601_08321 | R2601_10994 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | COG0753 Catalase. | 0.726 |
| EAU44089.1 | EAU46232.1 | R2601_08321 | R2601_25081 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Membrane-associated zinc metalloprotease, putative; COG0750 Predicted membrane-associated Zn-dependent proteases 1. | 0.758 |
| EAU44089.1 | EAU46806.1 | R2601_08321 | R2601_13329 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Glycerol kinase, putative; COG0554 Glycerol kinase; Belongs to the FGGY kinase family. | 0.828 |
| EAU44089.1 | EAU47110.1 | R2601_08321 | R2601_05063 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | WD domain/cytochrome c family protein; COG2319 FOG: WD40 repeat. | 0.711 |
| EAU44089.1 | EAU47768.1 | R2601_08321 | R2601_06648 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Oxidoreductase, FAD-binding, putative; COG0369 Sulfite reductase, alpha subunit (flavoprotein). | 0.694 |
| EAU44089.1 | glpK | R2601_08321 | R2601_12840 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.828 |
| EAU44089.1 | rpsF | R2601_08321 | R2601_25856 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.668 |
| EAU44089.1 | secY | R2601_08321 | R2601_09260 | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Preprotein translocase SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.695 |
| EAU44175.1 | EAU43816.1 | R2601_19352 | R2601_16745 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | Putative porin; COG3203 Outer membrane protein (porin). | 0.695 |
| EAU44175.1 | EAU44089.1 | R2601_19352 | R2601_08321 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | Periplasmic serine protease, DO/DeqQ family protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.817 |
| EAU44175.1 | EAU44857.1 | R2601_19352 | R2601_10994 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | COG0753 Catalase. | 0.726 |
| EAU44175.1 | EAU46806.1 | R2601_19352 | R2601_13329 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | Glycerol kinase, putative; COG0554 Glycerol kinase; Belongs to the FGGY kinase family. | 0.828 |
| EAU44175.1 | EAU47110.1 | R2601_19352 | R2601_05063 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | WD domain/cytochrome c family protein; COG2319 FOG: WD40 repeat. | 0.711 |
| EAU44175.1 | EAU47768.1 | R2601_19352 | R2601_06648 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | Oxidoreductase, FAD-binding, putative; COG0369 Sulfite reductase, alpha subunit (flavoprotein). | 0.694 |
| EAU44175.1 | glpK | R2601_19352 | R2601_12840 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.828 |
| EAU44175.1 | rpsF | R2601_19352 | R2601_25856 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.668 |
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