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R2601_09178 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09178" - Isocitrate lyase family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Textmining
[Homology]
Score
R2601_09178Isocitrate lyase family protein (288 aa)    
Predicted Functional Partners:
R2601_09183
3-ketosteroid dehydrogenase, putative (454 aa)
 
   
    0.980
R2601_09173
Isochorismatase family protein (205 aa)
 
        0.956
R2601_09163
Hydantoin utilization protein B, putative (564 aa)
 
          0.932
R2601_09158
Tautomerase, putative (185 aa)
 
          0.921
R2601_21972
Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (923 aa)
 
 
  0.910
R2601_09168
Hydantoin utilization protein A (686 aa)
 
          0.909
acsA
Acyl-activating enzyme ; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (656 aa)
   
 
  0.898
R2601_21717
Acetyl-coenzyme A synthetase (524 aa)
   
 
  0.884
R2601_09148
3-isopropylmalate dehydratase large subunit ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (463 aa)
   
 
  0.872
R2601_22706
Aconitate hydratase (929 aa)
       
  0.861
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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