STRINGSTRING
R2601_09877 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09877" - Methyltransferase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_09877Methyltransferase (367 aa)    
Predicted Functional Partners:
R2601_23830
DNA-binding response regulator CtrA (179 aa)
         
  0.819
lon
ATP-dependent protease La ; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (801 aa)
         
  0.774
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (215 aa)
     
      0.770
R2601_17943
HNH endonuclease family protein (194 aa)
 
          0.622
R2601_18563
Uncharacterized protein (86 aa)
 
          0.608
R2601_23670
Cobalt chelatase, pCobT subunit (625 aa)
   
          0.568
R2601_18223
Putative periplasmic thiol-disulphide interchange protein (DsbA family) (214 aa)
 
          0.558
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (451 aa)
           
  0.550
R2601_09887
Oxidoreductase, short chain dehydrogenase/reductase family protein (252 aa)
              0.548
R2601_08036
DnaJ domain protein (209 aa)
 
          0.507
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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