Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAU44129.1 | EAU44657.1 | R2601_11634 | R2601_24355 | Hypothetical protein. | COG2927 DNA polymerase III, chi subunit. | 0.516 |
EAU44129.1 | EAU46119.1 | R2601_11634 | R2601_11629 | Hypothetical protein. | Hypothetical protein. | 0.976 |
EAU44129.1 | EAU47325.1 | R2601_11634 | R2601_20976 | Hypothetical protein. | DNA-binding protein, putative; COG1396 Predicted transcriptional regulators. | 0.505 |
EAU44129.1 | EAU48082.1 | R2601_11634 | R2601_13990 | Hypothetical protein. | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | 0.419 |
EAU44129.1 | EAU48283.1 | R2601_11634 | R2601_14995 | Hypothetical protein. | HD domain protein; COG1896 Predicted hydrolases of HD superfamily. | 0.472 |
EAU44129.1 | recO | R2601_11634 | R2601_12930 | Hypothetical protein. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.410 |
EAU44129.1 | trmB | R2601_11634 | R2601_08731 | Hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.665 |
EAU44657.1 | EAU44129.1 | R2601_24355 | R2601_11634 | COG2927 DNA polymerase III, chi subunit. | Hypothetical protein. | 0.516 |
EAU44657.1 | EAU46119.1 | R2601_24355 | R2601_11629 | COG2927 DNA polymerase III, chi subunit. | Hypothetical protein. | 0.519 |
EAU44657.1 | EAU47325.1 | R2601_24355 | R2601_20976 | COG2927 DNA polymerase III, chi subunit. | DNA-binding protein, putative; COG1396 Predicted transcriptional regulators. | 0.456 |
EAU44657.1 | EAU48082.1 | R2601_24355 | R2601_13990 | COG2927 DNA polymerase III, chi subunit. | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | 0.405 |
EAU44657.1 | recO | R2601_24355 | R2601_12930 | COG2927 DNA polymerase III, chi subunit. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.762 |
EAU46118.1 | EAU46119.1 | R2601_11624 | R2601_11629 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. | Hypothetical protein. | 0.609 |
EAU46118.1 | rpoZ | R2601_11624 | R2601_11619 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.722 |
EAU46119.1 | EAU44129.1 | R2601_11629 | R2601_11634 | Hypothetical protein. | Hypothetical protein. | 0.976 |
EAU46119.1 | EAU44657.1 | R2601_11629 | R2601_24355 | Hypothetical protein. | COG2927 DNA polymerase III, chi subunit. | 0.519 |
EAU46119.1 | EAU46118.1 | R2601_11629 | R2601_11624 | Hypothetical protein. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. | 0.609 |
EAU46119.1 | EAU46869.1 | R2601_11629 | R2601_13644 | Hypothetical protein. | Hypothetical protein. | 0.557 |
EAU46119.1 | EAU47325.1 | R2601_11629 | R2601_20976 | Hypothetical protein. | DNA-binding protein, putative; COG1396 Predicted transcriptional regulators. | 0.671 |
EAU46119.1 | EAU48082.1 | R2601_11629 | R2601_13990 | Hypothetical protein. | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | 0.632 |
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