STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU44537.1COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component. (430 aa)    
Predicted Functional Partners:
EAU44538.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.988
EAU44540.1
ABC branched amino acid transporter family, inner membrane subunit; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.963
EAU44541.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.948
EAU44535.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.944
EAU45595.1
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.928
EAU47904.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.927
EAU44533.1
phenylacetate-CoA ligase, putative; COG1541 Coenzyme F390 synthetase.
 
    0.918
EAU44542.1
AMP-binding enzyme; COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
 
    0.887
EAU48296.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.879
EAU45851.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.879
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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