STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU46798.1COG1176 ABC-type spermidine/putrescine transport system, permease component I. (296 aa)    
Predicted Functional Partners:
EAU46797.1
Putrescine ABC transporter, ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  0.988
EAU46796.1
Putrescine ABC transporter, periplasmic putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.973
EAU46799.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
0.971
EAU48420.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.931
EAU46075.1
Probable permease of ABC transporter; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.916
EAU47986.1
Polyamine ABC transporter (permease); COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.909
EAU46074.1
ABC putrescine transporter, periplasmic substrate-binding subunit; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.903
EAU45807.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.901
EAU45993.1
Probable spermidineputrescine ABC transporter permease protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.893
EAU46077.1
Probable ATP-binding component of ABC transporter; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
  0.877
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.