STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU46839.1Hypothetical protein. (37 aa)    
Predicted Functional Partners:
EAU46838.1
Putative urea/short-chain amide transport system substrate-binding protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
       0.572
EAU46837.1
Putative permease of ABC transporter; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
       0.526
EAU46834.1
ATPase; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
       0.512
EAU46835.1
ABC-type transport system ATP-binding protein II (probable substrates urea/short chain-amides); COG4674 Uncharacterized ABC-type transport system, ATPase component.
       0.512
EAU46836.1
ABC-type transport system permease protein II (probable substrates urea/short chain-amides); COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.512
EAU46840.1
Amidohydrolase; COG0388 Predicted amidohydrolase.
       0.425
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.